Speech-based automatic depression detection via biomarkers identification and artificial intelligence approaches

Depression has become one of the most prevalent mental health issues, affecting more than 300 million people all over the world. However, due to factors such as limited medical resources and accessibility to health care, there are still a large number of patients undiagnosed. In addition, the traditional approaches to depression diagnosis have limitations because they are usually time-consuming, and depend on clinical experience that varies across different clinicians. From this perspective, the use of automatic depression detection can make the diagnosis process much faster and more accessible. In this thesis, we present the possibility of using speech for automatic depression detection. This is based on the findings in neuroscience that depressed patients have abnormal cognition mechanisms thus leading to the speech differs from that of healthy people. Therefore, in this thesis, we show two ways of benefiting from automatic depression detection, i.e., identifying speech markers of depression and constructing novel deep learning models to improve detection accuracy. The identification of speech markers tries to capture measurable depression traces left in speech. From this perspective, speech markers such as speech duration, pauses and correlation matrices are proposed. Speech duration and pauses take speech fluency into account, while correlation matrices represent the relationship between acoustic features and aim at capturing psychomotor retardation in depressed patients. Experimental results demonstrate that these proposed markers are effective at improving the performance in recognizing depressed speakers. In addition, such markers show statistically significant differences between depressed patients and non-depressed individuals, which explains the possibility of using these markers for depression detection and further confirms that depression leaves detectable traces in speech. In addition to the above, we propose an attention mechanism, Multi-local Attention (MLA), to emphasize depression-relevant information locally. Then we analyse the effectiveness of MLA on performance and efficiency. According to the experimental results, such a model can significantly improve performance and confidence in the detection while reducing the time required for recognition. Furthermore, we propose Cross-Data Multilevel Attention (CDMA) to emphasize different types of depression-relevant information, i.e., specific to each type of speech and common to both, by using multiple attention mechanisms. Experimental results demonstrate that the proposed model is effective to integrate different types of depression-relevant information in speech, improving the performance significantly for depression detection

The Relationship Between Speech Features Changes When You Get Depressed: Feature Correlations for Improving Speed and Performance of Depression Detection

This work shows that depression changes the correlation between features extracted from speech. Furthermore, it shows that using such an insight can improve the training speed and performance of depression detectors based on SVMs and LSTMs. The experiments were performed over the Androids Corpus, a publicly available dataset involving 112 speakers, including 58 people diagnosed with depression by professional psychiatrists. The results show that the models used in the experiments improve in terms of training speed and performance when fed with feature correlation matrices rather than with feature vectors. The relative reduction of the error rate ranges between 23.1% and 26.6% depending on the model. The probable explanation is that feature correlation matrices appear to be more variable in the case of depressed speakers. Correspondingly, such a phenomenon can be thought of as a depression marker

Disrupted Resting Frontal–Parietal Attention Network Topology Is Associated With a Clinical Measure in Children With Attention-Deficit/Hyperactivity Disorder

Purpose: Although alterations in resting-state functional connectivity between brain regions have been reported in children with attention-deficit/hyperactivity disorder (ADHD), the spatial organization of these changes remains largely unknown. Here, we studied frontal–parietal attention network topology in children with ADHD, and related topology to a clinical measure of disease progression.Methods: Resting-state fMRI scans were obtained from New York University Child Study Center, including 119 children with ADHD (male n = 89; female n = 30) and 69 typically developing controls (male n = 33; female n = 36). We characterized frontal–parietal functional networks using standard graph analysis (clustering coefficient and shortest path length) and the construction of a minimum spanning tree, a novel approach that allows a unique and unbiased characterization of brain networks.Results: Clustering coefficient and path length in the frontal–parietal attention network were similar in children with ADHD and typically developing controls; however, diameter was greater and leaf number, tree hierarchy, and kappa were lower in children with ADHD, and were significantly correlated with ADHD symptom score. There were significant alterations in nodal eccentricity in children with ADHD, involving prefrontal and occipital cortex regions, which are compatible with the results of previous ADHD studies.Conclusions: Our results indicate the tendency to deviate from a more centralized organization (star-like topology) towards a more decentralized organization (line-like topology) in the frontal–parietal attention network of children with ADHD. This represents a more random network that is associated with impaired global efficiency and network decentralization. These changes appear to reflect clinically relevant phenomena and hold promise as markers of disease progression

Human-imperceptible, Machine-recognizable Images

Massive human-related data is collected to train neural networks for computer vision tasks. A major conflict is exposed relating to software engineers between better developing AI systems and distancing from the sensitive training data. To reconcile this conflict, this paper proposes an efficient privacy-preserving learning paradigm, where images are first encrypted to become ``human-imperceptible, machine-recognizable'' via one of the two encryption strategies: (1) random shuffling to a set of equally-sized patches and (2) mixing-up sub-patches of the images. Then, minimal adaptations are made to vision transformer to enable it to learn on the encrypted images for vision tasks, including image classification and object detection. Extensive experiments on ImageNet and COCO show that the proposed paradigm achieves comparable accuracy with the competitive methods. Decrypting the encrypted images requires solving an NP-hard jigsaw puzzle or an ill-posed inverse problem, which is empirically shown intractable to be recovered by various attackers, including the powerful vision transformer-based attacker. We thus show that the proposed paradigm can ensure the encrypted images have become human-imperceptible while preserving machine-recognizable information. The code is available at \url{https://github.com/FushengHao/PrivacyPreservingML.

Multi-Local Attention for Speech-Based Depression Detection

This article shows that an attention mechanism, the Multi-Local Attention, can improve a depression detection approach based on Long Short-Term Memory Networks. Besides leading to higher performance metrics (e.g., Accuracy and F1 Score), Multi-Local Attention improves two other aspects of the approach, both important from an application point of view. The first is the effectiveness of a confidence score associated to the detection outcome at identifying speakers more likely to be classified correctly. The second is the amount of speaking time needed to classify a speaker as depressed or non-depressed. The experiments were performed over read speech and involved 109 participants (including 55 diagnosed with depression by professional psychiatrists). The results show accuracies up to 88.0% (F1 Score 88.0%)

Multiple mesodermal lineage differentiation of Apodemus sylvaticus embryonic stem cells in vitro

<p>Abstract</p> <p>Background</p> <p>Embryonic stem (ES) cells have attracted significant attention from researchers around the world because of their ability to undergo indefinite self-renewal and produce derivatives from the three cell lineages, which has enormous value in research and clinical applications. Until now, many ES cell lines of different mammals have been established and studied. In addition, recently, AS-ES1 cells derived from <it>Apodemus sylvaticus </it>were established and identified by our laboratory as a new mammalian ES cell line. Hence further research, in the application of AS-ES1 cells, is warranted.</p> <p>Results</p> <p>Herein we report the generation of multiple mesodermal AS-ES1 lineages via embryoid body (EB) formation by the hanging drop method and the addition of particular reagents and factors for induction at the stage of EB attachment. The AS-ES1 cells generated separately in vitro included: adipocytes, osteoblasts, chondrocytes and cardiomyocytes. Histochemical staining, immunofluorescent staining and RT-PCR were carried out to confirm the formation of multiple mesodermal lineage cells.</p> <p>Conclusions</p> <p>The appropriate reagents and culture milieu used in mesodermal differentiation of mouse ES cells also guide the differentiation of in vitro AS-ES1 cells into distinct mesoderm-derived cells. This study provides a better understanding of the characteristics of AS-ES1 cells, a new species ES cell line and promotes the use of Apodemus ES cells as a complement to mouse ES cells in future studies.</p

Identification of Heat-Tolerant Genes in Non-Reference Sequences in Rice by Integrating Pan-Genome, Transcriptomics, and QTLs.

The availability of large-scale genomic data resources makes it very convenient to mine and analyze genes that are related to important agricultural traits in rice. Pan-genomes have been constructed to provide insight into the genome diversity and functionality of different plants, which can be used in genome-assisted crop improvement. Thus, a pan-genome comprising all genetic elements is crucial for comprehensive variation study among the heat-resistant and -susceptible rice varieties. In this study, a rice pan-genome was firstly constructed by using 45 heat-tolerant and 15 heat-sensitive rice varieties. A total of 38,998 pan-genome genes were identified, including 37,859 genes in the reference and 1141 in the non-reference contigs. Genomic variation analysis demonstrated that a total of 76,435 SNPs were detected and identified as the heat-tolerance-related SNPs, which were specifically present in the highly heat-resistant rice cultivars and located in the genic regions or within 2 kbp upstream and downstream of the genes. Meanwhile, 3214 upregulated and 2212 downregulated genes with heat stress tolerance-related SNPs were detected in one or multiple RNA-seq datasets of rice under heat stress, among which 24 were located in the non-reference contigs of the rice pan-genome. We then mapped the DEGs with heat stress tolerance-related SNPs to the heat stress-resistant QTL regions. A total of 1677 DEGs, including 990 upregulated and 687 downregulated genes, were mapped to the 46 heat stress-resistant QTL regions, in which 2 upregulated genes with heat stress tolerance-related SNPs were identified in the non-reference sequences. This pan-genome resource is an important step towards the effective and efficient genetic improvement of heat stress resistance in rice to help meet the rapidly growing needs for improved rice productivity under different environmental stresses. These findings provide further insight into the functional validation of a number of non-reference genes and, especially, the two genes identified in the heat stress-resistant QTLs in rice

Ag@Ni Core-Shell Nanowire Network for Robust Transparent Electrodes Against Oxidation and Sulfurization

Silver nanowire (Ag NW) based transparent electrodes are inherently unstable to moist and chemically reactive environment. A remarkable stability improvement of the Ag NW network film against oxidizing and sulfurizing environment by local electrodeposition of Ni along Ag NWs is reported. The optical transmittance and electrical resistance of the Ni deposited Ag NW network film can be easily controlled by adjusting the morphology and thickness of the Ni shell layer. The electrical conductivity of the Ag NW network film is increased by the Ni coating via welding between Ag NWs as well as additional conductive area for the electron transport by electrodeposited Ni layer. Moreover, the chemical resistance of Ag NWs against oxidation and sulfurization can be dramatically enhanced by the Ni shell layer electrodeposited along the Ag NWs, which provides the physical barrier against chemical reaction and diffusion as well as the cathodic protection from galvanic corrosion

Assessment of an Optimal Design Method for a High-Energy Ultrasonic Igniter Based on Multi-Objective Robustness Optimization

The current deterministic optimization design method ignores uncertainties in the material properties and potential machining error which could lead to unreliable or unstable designs. To improve the design efficiency and anti-jamming ability of a high-energy ultrasonic igniter, a Six Sigma multi-objective robustness optimization design method based on the response surface model and the design of the experiment has been proposed. In this paper, the initial structural dimensions of a high-energy ultrasonic igniter have been obtained by employing one-dimensional longitudinal vibration theory. The finite element simulation method of COMSOL Multiphysics software has been verified by the finite element simulation results of ANSYS Workbench software. The optimal igniter design has been achieved by using the proposed method, which is based on the finite element method, the Optimal Latin Hypercube Design method, Grey Relational Analysis, the response surface model, the non-dominated sorting genetic algorithm, and the mean value method. Considering the influence of manufacturing errors on the igniter’s performance, the Six Sigma method was used to optimize the robustness of the igniter. The Eigenfrequency analysis and the vibration velocity ratio calculation were conducted to verify the design’s effectiveness. The results reveal that the longitudinal resonant frequency of the deterministic optimization scheme and the robustness optimization scheme are closer to the design’s target frequency. The relative error is less than 0.1%. Compared with the deterministic optimization scheme, the vibration velocity ratio of the robustness optimization scheme is 2.8, which is about 15.7% higher than that of the deterministic optimization scheme, and the quality level of the design targets is raised to above Six Sigma. The proposed method can provide an efficient and accurate optimal design for developing a new special piezoelectric transducer